Chenming Cui
Bioinformatics Scientist
Beijing, United States
Summary
👤
Senior🎓
Top SchoolChenming Cui is a Bioinformatics Scientist with eight years of experience translating complex NGS datasets—from Illumina to ultra-long Nanopore and PacBio reads—into biological insight at companies and academic labs. He combines deep expertise in transcriptome/genome assembly, alternative splicing, GWAS, comparative phylogenomics and functional network analysis with statistical modeling, machine learning and custom Python/R pipelines. Comfortable deploying tools on HPC clusters and building SQL-backed workflows, he has accelerated assembly and polishing of noisy long reads and created efficient end-to-end pipelines used in diverse projects from pathogen metagenomes to crop phylo-GWAS. Based in Beijing with a PhD in Genomics/Bioinformatics, he pairs rigor from academic research with production-focused development at Foundation Medicine, and—on a lighter note—maintains a playful GitHub persona as “a programmer with a cute cat.”
8 years of coding experience
6 years of employment as a software developer
Master's degree, Biochemistry, Master's degree, Biochemistry at Georgetown University School of MedicineDoctor of Philosophy - PhD, Genomics/Bioinformatics, 3.9/4.0, Doctor of Philosophy - PhD, Genomics/Bioinformatics, 3.9/4.0 at Virginia Tech
Github Skills (49)
application-management10
dataplane10
automation10
nextjs9
chatgpt-api9
python9
llm9
low-code9
no-code9
tcp9
spring-boot9
ai9
uniapp9
claude9
agent9
Programming languages (8)
Github contributions (5)
chen622/nextjs-notion-starter-kit
Jul 2022 - Jun 2026
Deploy your own Notion-powered website in minutes with Next.js and Vercel.
Contributions:8 PRs, 21 pushes, 5 branches in 3 years 11 months
next-jsreactnotionvercelminutes
chen622/uring-server
Jul 2020 - Dec 2021
Contributions:19 commits, 14 pushes, 1 branch in 1 year 5 months
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