Claire Rioualen
Research Engineer at Institut Français de Bioinformatique
Marseille, Provence-Alpes-Côte d'Azur, France
Summary
👤
Senior🎓
Top SchoolClaire Rioualen is a research engineer with 11 years of experience at the intersection of bioinformatics, reproducible workflows and regulatory genomics. After a Master’s in bioinformatics she completed a PhD at UNAM on Escherichia coli transcriptional regulation and now contributes to EDAM ontology development at the French Institute of Bioinformatics to improve interoperability and annotation of life‑science digital resources. She has a strong track record building production-grade pipelines (Snakemake, Docker) for ChIP‑seq and RNA‑seq, teaching NGS analysis, and integrating multi‑omic datasets across international collaborations. Fluent in collaborative, cross‑cultural research (France–Mexico) and passionate about language, neurodiversity and visual communication, she combines technical rigor with a knack for connecting people and ideas beyond purely computational problems.
11 years of coding experience
6 years of employment as a software developer
Universidad Nacional Autónoma de México (UNAM)Bachelor, Biochemistry, Molecular Biology, Bachelor, Biochemistry, Molecular Biology at Nantes UniversitéMaster, Bioinformatics, Master, Bioinformatics at Aix-Marseille UniversityLycée La Mennais Guérande
French, English, Spanish, Japanese, Dutch, Italian
Stackoverflow
958reputation
59kreached
19answers
21questions
Github Skills (55)
operation10
identifier10
ontology10
r-package9
data-analysis9
science9
sequence8
biodiversity8
bioinformatics8
snakemake8
taxonomy7
bioinformatics-analysis7
fastq-files7
r7
ckan7
Programming languages (12)
Github contributions (5)
rioualen/edamontology
Oct 2023 - Jun 2026
EDAM is an ontology of bioscientific data analysis and data management. EDAM concentrates on topics, operations, types of data, and data formats related to analysis, modelling, optimisation, and data life-cycle in biosciences, and in other research and science-based applications.
Contributions:37 pushes, 13 branches in 2 years 9 months
rioualen/EcoliGenes
Jul 2020 - Jan 2025
Contributions:61 pushes, 1 branch in 4 years 6 months
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