Darrin Lemmer
Bioinformatics Lead
Flagstaff, Arizona, United States
Summary
👤
Senior🎓
Top SchoolDarrin Lemmer is a Bioinformatics Lead and software engineer with over a decade of experience building production-grade bioinformatics pipelines, databases, and web applications. He combines deep expertise in Java and C++ with practical genomics know-how, having designed tools like the Amplicon Sequencing Analysis Pipeline (ASAP) and contributed to NASP, PIMS and a LIMS replacement. At TGen he leads a small team, manages concurrent projects, and translates lab needs into user-friendly scripts and modules that lower the barrier to command-line analysis. Earlier roles at IBM honed his enterprise software, database design, and customer-facing skills across large-scale Java web systems. Based in Flagstaff, AZ, he brings a rare blend of hands-on wet-lab experience and production software engineering that accelerates pathogen genomics research.
13 years of coding experience
14 years of employment as a software developer
BS, Computer Science, 3.37/4.0, BS, Computer Science, 3.37/4.0 at Michigan Technological UniversityMS, Bioinformatics, 3.75/4.0, MS, Bioinformatics, 3.75/4.0 at Iowa State University
Github Skills (12)
genomics9
bioinformatics9
sequencing8
pipeline7
pysam5
tabix5
htslib4
simulation4
samtools4
bcftools4
python4
simulator3
Programming languages (3)
Github contributions (5)
TGenNorth/NASP
Nov 2013 - Dec 2019
Northern Arizona SNP Pipeline
Contributions:1 release, 105 commits, 44 pushes in 6 years 1 month
bioinformaticssnppipelinegenomics
TGenNorth/ASAP
Jun 2016 - Jan 2019
Contributions:1 release, 9 commits, 11 pushes in 2 years 7 months
analysis-pipelinepipelineampliconamplicon-sequencingsequencing
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