David Pattinson
Applied Research Lead at Fortell
Town of Huntington, New York, United States
Summary
👤
Senior🎓
Top SchoolDavid Pattinson is a computational biologist and Scientist II at the University of Wisconsin–Madison with 11 years of experience applying Bayesian inference, phylogenetics, and high-throughput computing to viral evolution and serological inference. He leads interdisciplinary projects that predict seasonal influenza evolution, map antigenic effects of mutations, and reconstruct infection dynamics from noisy data, with hands-on experience during fast-moving outbreaks such as COVID-19 and bovine H5N1. A Cambridge-trained PhD, he routinely builds custom visualizations and antigenic cartography to reveal insights that standard pipelines miss. Colleagues rely on him to translate complex models into actionable public-health guidance while teaching and mentoring within his research institute.
11 years of coding experience
6 years of employment as a software developer
Doctor of Philosophy - PhD Biomathematics, Bioinformatics, and Computational Biology, Doctor of Philosophy - PhD Biomathematics, Bioinformatics, and Computational Biology at University of CambridgeMaster's degree Biosystematics, Master's degree Biosystematics at Imperial College London
Stackoverflow
336reputation
25kreached
6answers
1question
Github Skills (87)
probabilistic-programming10
python10
mcmc10
bayesian-inference10
variational-inference10
scripting10
bayesian10
qt9
simulation9
r-package9
hardlink8
linux8
gtk8
rsync8
backup8
Programming languages (12)
Github contributions (5)
IRI-UW-Bioinformatics/ititer
Jul 2021 - Sep 2022
Contributions:3 releases, 64 commits, 36 pushes in 1 year 2 months
davipatti/eggcellent
May 2018 - Sep 2019
Make eggs.
Contributions:1 release, 5 commits, 2 PRs in 1 year 3 months
eggs
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