Erik Fasterius
Senior Bioinformatician
Stockholm County, Sweden
Summary
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Rockstar🎓
Top SchoolErik Fasterius is a Senior Bioinformatician with 11 years of experience, currently at NBIS Sweden, specializing in transcriptomics, reproducible pipeline development, and data visualization. He combines a PhD in Biotechnology with hands-on experience in cancer biology, drug screening, cell line authentication, and applied machine learning, giving him fluency across both computational and wet-lab perspectives. Erik builds robust, reproducible workflows and tooling that bridge research and production analytics, with a strong interest in making complex analyses transparent and shareable. Based in Stockholm, he is an active open-source practitioner (fasterius on GitHub) and maintains a personal site showcasing tools and projects that emphasize reproducibility and clear visual communication.
11 years of coding experience
1 year of employment as a software developer
Doctor of Philosophy - PhD, Biotechnology, Doctor of Philosophy - PhD, Biotechnology at KTH Royal Institute of Technology
Swedish, English
Stackoverflow
4,447reputation
747kreached
2answers
33questions
Github Skills (104)
package-management10
image-processing10
testing10
spatial-transcriptomics10
transcriptomics10
spatial10
clustering10
nf-core10
microscopy10
dimensionality-reduction10
nextflow10
pipeline10
rna-seq10
bioconda10
elixir10
Programming languages (18)
Github contributions (5)
nf-core/spatialvi
Mar 2022 - Dec 2022
Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.
Contributions:40 reviews, 69 commits, 80 PRs in 8 months
transcriptomicsnf-corenextflowworkflowpipeline
fasterius/dotfiles
Mar 2017 - Dec 2022
Contributions:443 commits, 299 pushes, 5 branches in 5 years 10 months
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