Ethan Armand
PHD Student Bioinformatics And Systems Biology
San Diego, California, United States
Summary
👤
Senior🎓
Top SchoolEthan Armand is a bioinformatics PhD student at UC San Diego's Ren lab with nine years of experience developing computational methods for single-cell epigenomic, transcriptomic, and multi-omic data. Prior roles in the Mukamel Lab included building analysis pipelines and custom algorithms to extract cell-type specific insights from complex sequencing datasets. With a BS in Cognitive Science focused on machine learning and neural computation, he blends machine learning intuition with hands-on genomic data engineering. Based in San Diego, he contributes to the mlpc-ucsd community on GitHub and is active in academic publishing, bringing a research-forward approach to reproducible, scalable bioinformatics.
9 years of coding experience
3 years of employment as a software developer
University of California, San Diego
Github Skills (24)
single-cell-genomics8
bioinformatics7
transcriptomics7
rna-seq7
cran6
sequencing6
crossword6
genomics5
single-cell-analysis5
python5
machine-learning4
scanpy4
chip-seq4
mojo4
data-science3
Programming languages (6)
Github contributions (5)
ejarmand/abc_lite
May 2024 - Dec 2024
Lite wrapper of cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
Contributions:2 PRs, 14 pushes, 1 branch in 7 months
ejarmand/configs
Dec 2024 - Mar 2026
Contributions:12 pushes, 1 branch in 1 year 3 months
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