Fabio Cumbo
Research Associate
Cleveland, Ohio, United States
Summary
🤩
Rockstar🎓
Top SchoolFabio Cumbo is a software engineer and research associate with a PhD in Computer Science and Automation and over a decade of experience building bioinformatics tools and data platforms for genomic and systems biology research. Currently at the Blankenberg Lab, Cleveland Clinic, he bridges advanced computational methods and practical software engineering to characterize microbial species and manage large genomic datasets. His career spans international research institutes and universities, contributions to the Galaxy project, and long-standing work integrating TCGA data into data-centric genomic computing pipelines. Known for crafting interoperable toolkits and data infrastructures, he combines algorithmic rigor with hands-on development—having built Cytoscape plugins, portals for genomic queries, and distributed systems for systems-biology collaboration. An under-the-radar strength is his consistent record of winning competitive research positions and translating academic research into reusable software.
11 years of coding experience
12 years of employment as a software developer
PhD in Computer Science and Automation, PhD in Computer Science and Automation at Università degli studi Roma TRE
Italian, English
Github Skills (63)
docker10
conda-forge10
taxonomy10
package-management10
python10
data-science10
feature-selection10
conda10
workflow-engine10
ncbi10
chip-seq10
genomes10
microbial-genomics10
sequencing10
pipeline10
Programming languages (9)
Github contributions (5)
cumbof/hdlib
Apr 2022 - May 2026
Hyperdimensional Computing Library for building Vector-Symbolic Architectures in Python 3
Contributions:23 releases, 1 review, 1 PR in 4 years 1 month
pythonvector-symbolic-architectureshyperdimensional-computingmachine-learningvectors
cumbof/computational-graphics-project
Jan 2018 - Jun 2022
Contributions:5 commits, 5 pushes in 4 years 5 months
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