Fabio Zanarello

Doctoral Student at Centre for Genomic Regulation (CRG)

Barcelona, Catalonia, Spain
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Summary

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Senior
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Top School
Fabio Zanarello is a doctoral researcher and bioinformatics specialist with eight years of experience mining genomes to solve real-world problems, currently pursuing a PhD in Biomedicine at Universitat Pompeu Fabra while affiliated with the Centre for Genomic Regulation and funded by Marie Skłodowska-Curie Actions. He blends hands-on industry experience from Illumina—where he progressed from intern to senior bioinformatics scientist—with academic training in molecular biotechnology and plant/agricultural biotech from Università degli Studi di Milano. His work focuses on scalable genome annotation across the tree of life, combining computational methods, genomics, and signal-processing instincts (he describes himself as passionate about genomes, computers, and waves). Comfortable moving between research and product environments, he brings a practical mindset for turning genomic data into actionable insights and a conviction that DNA holds solutions to many of humanity’s pressing issues.
code8 years of coding experience
job2 years of employment as a software developer
bookUniversity of Milan
bookDoctor of Philosophy - PhD Biomedicine, Doctor of Philosophy - PhD Biomedicine at Universitat Pompeu Fabra
bookDiploma Liceo scientifico, Diploma Liceo scientifico at ISIS Dalla Chiesa
languagesItalian, English, Spanish
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Github Skills (19)

computation8
bioinformatics7
classification6
nextflow4
rna-seq4
genome-annotation4
transcriptomics3
deep-learning3
sequencing3
doi3
structural-variation2
ab-initio2
python2
genomics2
computational-biology2

Programming languages (5)

NextflowPerlHTMLJupyter NotebookPython

Github contributions (5)

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apollo994/PlanTAMI

Aug 2018 - Nov 2019

Tool for normalised pointwise mutal information computation across two DE gene list
Contributions:42 commits, 3 PRs, 49 pushes in 1 year 3 months
computationbioinformaticsgene
apollo994/codon_signature

Sep 2019 - Sep 2023

Pipeline for alterntive classification using codon usage
Contributions:18 PRs, 68 pushes, 4 branches in 4 years 1 month
classification
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