Hugh Shanahan
Professor Of Open Science at Royal Holloway, University of London
Borough of Runnymede, England, United Kingdom
Summary
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Senior🎓
Top SchoolHugh Shanahan is a Professor of Open Science at Royal Holloway, University of London, with a multidisciplinary career bridging theoretical physics, computational biology, and research data science. Trained in Lattice QCD (PhD, Edinburgh) and early supercomputing work, he pivoted to bioinformatics in 1999 and has since developed novel quality-control methods for RNA‑seq and functional profiling approaches for metagenomics. He leads initiatives to make research interoperable and FAIR, co-chairing CODATA-RDA training for researchers from roughly 40 countries and contributing to the FAIRsFAIR and WDS communities. As Director of Student Experience he has helped grow his department’s student body nearly tenfold and shaped doctoral training partnerships with major UK institutions. His work spans hands-on algorithm development, cloud and big-data platforms (Hadoop/Spark) for genomics, and institution-level policy and training to embed open, reproducible practices. Unusually for an academic of his generation, he combines deep theoretical physics origins with pragmatic data-science engineering focused on accessibility for researchers in low- and middle-income countries.
10 years of coding experience
3 years of employment as a software developer
Ph.D., Theoretical Physics, Ph.D., Theoretical Physics at The University of EdinburghSt. Brendan's College, KilarneyB.sc., M.Sc., Physics, B.sc., M.Sc., Physics at University College Cork
Stackoverflow
1reputation
0reached
0answers
0questions
Github Skills (29)
jupyter-book8
data-science8
open-science7
webapp7
svd7
delta7
creative-commons7
science6
python6
jupyter-notebook5
ipython5
statistics5
traceability5
jupyter5
modeling-tool5
Programming languages (5)
Github contributions (5)
hughshanahan/GOFind
Jul 2016 - Aug 2018
Contributions:1 release, 19 pushes, 1 branch in 2 years
hughshanahan/CS2900-Lab-5
Mar 2019 - Mar 2023
Jupyter notebook for Lab 5
Contributions:1 PR, 9 pushes, 1 branch in 4 years
jupyter-bookjupyter-notebooknotebookjupyterlabjupyter
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