Ksenia Krasheninnikova
Senior Bioinformatician
Cambridge, England, United Kingdom
Summary
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Rockstar🎓
Top SchoolKsenia Krasheninnikova is a Senior Bioinformatician based in Cambridge with 11 years of experience applying computational and software engineering skills to genomics research. After early roles bridging programming and research at JetBrains and the Algorithmic Biology Lab, she progressed through academic bioinformatics at Dobzhansky Center to lead analyses and pipeline development at the Wellcome Sanger Institute since 2019. Trained with a master's in Bioinformatics and a specialist degree in Computer Software and System Administration, she combines rigorous algorithmic thinking with practical systems administration and tooling experience. Colleagues describe her as someone who moves fluidly between research questions and production-ready pipelines, translating complex genomic problems into reproducible, scalable workflows.
11 years of coding experience
2 years of employment as a software developer
Master's degree, Bioinformatics, Master's degree, Bioinformatics at St.Petersburg Academic UniversitySpecialist, Computer Software and System Administration, Specialist, Computer Software and System Administration at Togliatti State University
English, German
Github Skills (45)
test-data10
package-management10
testing10
conda10
nextflow10
genome-assembly10
bioinformatics10
genomics10
nf-core10
hierarchical9
pipeline9
annotate9
bioconda9
docker8
docker-image8
Programming languages (10)
Github contributions (5)
sanger-tol/genomeassembly
Sep 2022 - Dec 2022
A Nextflow pipeline for the production of genome assemblies from long reads and Hi-C data for the Tree of Life project
Contributions:2 releases, 57 reviews, 6 commits in 2 months
nextflowgenomicspipelinegenome-assembly
ksenia-krasheninnikova/MitoHiFi
May 2021 - Feb 2024
Find, circularise and annotate mitogenome from PacBio assemblies
Contributions:1 PR, 8 pushes, 6 branches in 2 years 9 months
bioinformaticsannotatepacbio
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