Ludvig Larsson
Bioinformatics Scientist
Stockholm, Sweden
Summary
👤
Senior🎓
Top SchoolLudvig Larsson is a bioinformatics scientist based in Stockholm with nine years of experience specializing in spatially resolved transcriptomics and six years of hands-on expertise with ST/Visium technology. He has built multiple open-source tools for processing, analysis, and visualization of spatial transcriptomics data and contributed to the first spatiotemporal atlas of the developing human heart. During his PhD he developed methods for analyzing low-quality tissue samples and applied spatial methods to cancer and mucosal biology, achieving an h-index of 18. Now at Pixelgen Technologies after academic roles at KTH and Karolinska, he blends deep technical proficiency with translational research experience. Colleagues value his ability to turn complex spatial datasets into reproducible pipelines and insightful visualizations that drive biological discovery.
9 years of coding experience
1 year of employment as a software developer
KTH Royal Institute of Technology2016, Biology, 2016, Biology at Technische Universität München
Github Skills (23)
sequencing9
spatial9
command-line-tool8
r8
nmf6
matrix-factorization3
rcpp3
git3
ggraph2
sparse-matrix2
network-analysis2
network-visualization2
miniz2
clustering2
compression2
Programming languages (6)
Github contributions (5)
almaan/genetech
Aug 2020 - Nov 2022
material related to the genetech courses
Contributions:201 commits, 108 pushes in 2 years 2 months
almaan/her2st
Apr 2020 - Jul 2020
Her2 Breast Cancer Project
Contributions:10 commits, 2 comments in 3 months
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