Reagon Karki
Data Scientist
Hamburg, Germany
Summary
👤
Senior🎓
Top SchoolReagon Karki is a data scientist at Fraunhofer ITMP in Hamburg with nine years of experience applying systems biology and chemoinformatics to EU- and German government-funded projects. He develops ML/AI models, integrates heterogeneous biological and chemical data, and builds disease models—work grounded in a PhD and teaching experience in bioinformatics from the University of Bonn. His background includes coordinating workshops on neurodegenerative disease modeling and supervising master's research using Bayesian and longitudinal approaches for Parkinson’s and ALS. Beyond research, he composes music available on Spotify, reflecting a creative streak that complements his methodical, interdisciplinary approach to complex biomedical problems.
9 years of coding experience
6 years of employment as a software developer
Bachelor of Technology - BTech, Biotechnology, Bachelor of Technology - BTech, Biotechnology at KL UniversityDoctor of Philosophy - PhD, Bioinformatics, Doctor of Philosophy - PhD, Bioinformatics at The University of Bonn
English, Nepali, German, Hindi
Github Skills (22)
object-graph8
infectious-diseases8
neo4j8
biology7
cheminformatics6
python6
data-repository6
knowledge-graph5
machine-learning4
cytoscapejs4
chemistry4
graph-database4
rest3
rest-client3
network-analysis2
Programming languages (6)
Github contributions (5)
Fraunhofer-ITMP/mpox-kg
Jul 2022 - Jan 2023
Source code and data repository for paper titled "Monkeypox Knowledge Graph: A comprehensive representation embedding chemical entities and associated biology of Monkeypox "
Contributions:7 releases, 58 commits, 49 pushes in 6 months
data-repositoryknowledge-graphmonkey-poxbiologycheminformatics
Fraunhofer-ITMP/ProtacKB
Apr 2022 - Mar 2024
Contributions:18 pushes, 2 branches in 1 year 11 months
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