Sarah Quelen
Bioinformatics And Genomics Researcher With HDR
Toulouse, Occitania, France
Summary
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Senior🎓
Top SchoolSarah Quelen is a bioinformatics and genomics researcher with 11+ years of experience bridging computational biology and functional genome annotation, holding a PhD and HDR. She contributed to large international consortia including ENCODE and mouse ENCODE during a formative postdoc at the Centre for Genomic Regulation and later led functional annotation projects for livestock at INRAE. Now at INSERM in Toulouse, her research focuses on mapping enhancer–gene relationships to illuminate genotype–phenotype links in human disease. Initially trained as a computer scientist, she combines algorithmic gene-finding expertise with hands-on regulatory genomics, routinely integrating transcriptomics and epigenomic data. Colleagues know her for turning complex multi-omics datasets into actionable annotations that feed both basic research and translational studies.
11 years of coding experience
13 years of employment as a software developer
ENSEIRBDoctor of Philosophy (PhD), Computational Biology, Doctor of Philosophy (PhD), Computational Biology at Université d'Evry-Val d'EssonneMaster AMIB, Computational Biology, Master AMIB, Computational Biology at Université Évry Paris-Saclay
Github Skills (55)
rna-seq10
bedtools9
nextflow9
pipeline9
sequencing9
bioinformatics9
pypi9
genomics8
nf-core8
reproducible-research8
slurm7
reproducible-science7
singularity7
aws7
groovy7
Programming languages (11)
Github contributions (5)
sdjebali/Scripts
Nov 2015 - Jan 2023
Contributions:17 releases, 48 commits, 188 pushes in 7 years 3 months
sdjebali/Overlap
Nov 2015 - Oct 2020
Contributions:1 release, 10 pushes, 1 branch in 4 years 11 months
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