Vedran Franke
Staff Scientist at Berlin Insitute for Medical Systems Biology
Berlin, Germany
Summary
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Senior🎓
Top SchoolVedran Franke is a Staff Scientist in Berlin with 14 years of experience at the intersection of genomics, immunology, transcriptional regulation, evolution and machine learning. He moved from a PhD in molecular biology focused on early embryonic development to a decade-long postdoc at the Max Delbrück Center, where he specialized in integrating heterogeneous high-throughput datasets (RNA-seq, ChIP-seq) and applying ML for biological insight. Now at the Berlin Institute for Medical Systems Biology, he combines deep domain expertise with practical skills in next-generation sequencing analysis and data integration to tackle complex systems-biology problems. Known for bridging wet-lab questions and computational solutions, he brings a rare blend of evolutionary perspective and machine-learning pragmatism to translational genomics.
14 years of coding experience
12 years of employment as a software developer
mr. sc., Molecular Biology, mr. sc., Molecular Biology at Sveuèilište u Zagrebu / University of Zagreb
English, Croatian, German
Github Skills (75)
snakemake10
guix10
genomics10
r10
r-package10
single-cell-genomics10
visualization10
cran10
next-generation-sequencing9
pipeline9
cancer-genomics9
chip-seq9
bioinformatics9
rna-seq8
nextflow8
Programming languages (9)
Github contributions (5)
frenkiboy/MyLib
May 2016 - Oct 2020
Contributions:316 commits, 285 pushes, 1 branch in 4 years 6 months
frenkiboy/genomationData
Oct 2013 - May 2017
Contributions:19 commits, 1 push in 3 years 7 months
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