Yin Chew

Assistant Professor at University of Birmingham

Birmingham, England, United Kingdom
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Summary

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Senior
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Top School
Yin Chew is an Assistant Professor and computational systems biologist with 11 years’ experience building multiscale, hybrid models that connect gene networks, metabolism, biomechanics and physiology for applications in healthcare and bioengineering. Trained as a chemical and bioprocess engineer and holding a PhD from the University of Edinburgh, she developed the Arabidopsis Framework Model linking circadian regulation to whole-plant growth and later prototyped a whole-cell model of human embryonic stem cells from multi-omics data at Mount Sinai. Her work spans reaction-diffusion simulation of single-cell metabolism to hybrid gene–mechanics models that reveal emergent behaviors and therapeutic implications. Based in Birmingham, she combines computational tool development with hands-on pipeline engineering and a track record of translating mechanistic insight into digital tools for biodesign. Colleagues describe her as a teacher and collaborator who thrives on mentoring visionary, diverse young researchers.
code11 years of coding experience
job3 years of employment as a software developer
bookDoctor of Philosophy - PhD, Computational Systems Biology, Doctor of Philosophy - PhD, Computational Systems Biology at The University of Edinburgh
bookMaster of Engineering (MEng), Bioprocess Engineering, Master of Engineering (MEng), Bioprocess Engineering at Universiti Teknologi Malaysia
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Github Skills (28)

systems-biology10
computational-biology10
bioinformatics9
genomics9
object-mapping8
modeling8
simulation8
databases7
quadratic-programming7
csv6
database6
data-integration6
reaction-network6
convex-optimization6
electrophysiology6

Programming languages (2)

Jupyter NotebookPython

Github contributions (5)

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KarrLab/wc_model_gen

Sep 2018 - Jul 2021

Framework for systematically and scalably designing whole-cell models from large datasets
Contributions:255 commits, 199 pushes in 2 years 10 months
whole-cell-modelingsystems-biologycomputational-biologycell-biologydynamical-modeling
YinHoon/discretised_FBA

Jul 2023 - Nov 2024

Contributions:9 pushes in 1 year 4 months
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